|
Basic Local Alignment Search Tool.
Examples of output formats from blastall flags
- pairwise (flag:
-m 0)
- master-slave showing identities (flag:
-m 1)
- master-slave no identities (flag:
-m 2)
- flat master-slave, show identities (flag:
-m 3)
- flat master-slave, no identities (flag:
-m 4)
- master-slave no identities and blunt ends (flag:
-m 5)
- flat master-slave, no identities and blunt ends (flag:
-m 6)
- XML Blast output (flag:
-m 7)
- tabular (flag:
-m 8)
- tabular with comment lines (flag:
-m 9)
pairwise (flag: -m 0)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
>SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp /
malaysia). erythrocyte-binding antigen eba-175. 2/1996
Length = 1435
Score = 950 bits (2430), Expect = 0.0
Identities = 461/501 (92%), Positives = 461/501 (92%)
Query: 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY
Sbjct: 500 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 559
Query: 61 WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD 120
WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD
Sbjct: 560 WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD 619
Query: 121 IENIPQFFRWFSEWGDDYCQDKTKMIETLKVECKEKPCEDDNCKSKCNSYKEWISKKKEE 180
IENIPQFFRWFSEWGDDYCQDKTKMIETLKVECKEKPCEDDNCKSKCNSYKEWISKKKEE
Sbjct: 620 IENIPQFFRWFSEWGDDYCQDKTKMIETLKVECKEKPCEDDNCKSKCNSYKEWISKKKEE 679
Query: 181 YNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNKC 240
YNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNKC
Sbjct: 680 YNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKEELHSDYKNKC 739
Query: 241 TMCPEVKDVPISIIRNNEQTSQEAVPEENTEIAHRTETPSISEGPKGNEQKERDDDSLSK 300
TMCPEVKDVPISIIRNNEQTSQEAVPEENTEIAHRTETPSISEGPKGNEQKERDDDSLSK
Sbjct: 740 TMCPEVKDVPISIIRNNEQTSQEAVPEENTEIAHRTETPSISEGPKGNEQKERDDDSLSK 799
Query: 301 ISVSPENSRPETDAKDTSNLLKLKGDVDISMPKAVIGSSPNDNINVTEQGDNISGVNSKP 360
ISVSPENSRPETDAKDTSNLLKLKGDVDISMPKAVIGSSPNDNINVTEQGDNISGVNSKP
Sbjct: 800 ISVSPENSRPETDAKDTSNLLKLKGDVDISMPKAVIGSSPNDNINVTEQGDNISGVNSKP 859
Query: 361 LSDDVRPDKKELEDQNSDESEETVVNHISKSPSIXXXXXXXXXXXXXXXXXXXXXXXXID 420
LSDDVRPDKKELEDQNSDESEETVVNHISKSPSI ID
Sbjct: 860 LSDDVRPDKKELEDQNSDESEETVVNHISKSPSINNGDDSGSGSATVSESSSSNTGLSID 919
Query: 421 DDRNGDTFVRTQDTANTEDVIRXXXXXXXXXXXXXXXXRHSTSESLSSPEEKMLTDNEGG 480
DDRNGDTFVRTQDTANTEDVIR RHSTSESLSSPEEKMLTDNEGG
Sbjct: 920 DDRNGDTFVRTQDTANTEDVIRKENADKDEDEKGADEERHSTSESLSSPEEKMLTDNEGG 979
Query: 481 NSLNHEEVKEHTSNSDNVQQS 501
NSLNHEEVKEHTSNSDNVQQS
Sbjct: 980 NSLNHEEVKEHTSNSDNVQQS 1000
Score = 79.2 bits (192), Expect = 2e-14
Identities = 65/273 (23%), Positives = 116/273 (41%), Gaps = 29/273 (10%)
Query: 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
+I + Y K + K+H + + ES++L +K NK + + C + +F D + G D
Sbjct: 194 SIIKTYTKETM--KDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDM 251
Query: 61 WNDLSNRKLVGKINTNSKYVHRNKKNDKL--FRDEWWKVIKKDVWNVISWVFKDKTVCKE 118
+ K KI K H K+ FR EWW ++ +W + K+
Sbjct: 252 DFGGYSTKAENKIQEVFKGAHGEISEHKIKNFRKEWWNEFREKLWEAMLSEHKNNI---- 307
Query: 119 DDIENIP----QFFRWFSEWGDDYCQDKTKMIETLKVECKE----KPCEDDNCKSKCNSY 170
++ +NIP Q +W EW ++ ++ + K +CK + CE + C C Y
Sbjct: 308 NNCKNIPQEELQITQWIKEWHGEFLLERDNRSKLPKSKCKNNTLYEACEKE-CIDPCMKY 366
Query: 171 KEWISKKKEEYNKQAKQYQEYQKGNNYKMYSEFKSIKPEVYLKKYSEKCSNLNFEDEFKE 230
++WI + K E++ +K+Y+ K+ E E YL K SE ++
Sbjct: 367 RDWIIRSKFEWHTLSKEYE------TQKVPKE----NAENYLIKISENKNDAKV-SLLLN 415
Query: 231 ELHSDYKNKCTMCPEVKDVPISIIRNNEQTSQE 263
++Y C C + S++ N+ T +E
Sbjct: 416 NCDAEYSKYCD-CKHTTTLVKSVLNGNDNTIKE 447
top | back
master-slave showing identities (flag: -m 1)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
/////////////////////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 ............................................................ 559
16961 194 S.IKT.T.ETM--.D.FIEASKK..QL.LK.ND..YNSKF.NDLKNS.L.YGHLAM.N.M 251
46728 267 .NL..KLTYD.AV.GDL.LK..N.VYSEDL..D.KWSLE.FG...M..-- 314
46730 270 .YL.RKLIYD.AV.GDL.LKLNNYRYN.DF..D.RWSLG.FG...M...M 319
46729 282 L.LK..N.VYSEDL..D.KWSLQ.FG...M...M 315
46726 267 .NL.RKLMYD.AV.GDL.LK.NNYQYN..F..D.RWGLG.FG...M..-- 314
21673 156 .KHK.D.KK..NSEVMSLYKTGQHKPKNA.EH 187
14062 70 LM..EI.HL.E.LN---- 83
31620 37 .TKVE.K.RSDDG.E.I.DDDDEDCE.VV..EECNED 73
47270 269 .STLL.K.LKF.CVQNMKM..E.N.WNKRQ..IDY.AQETG...SA.TTLQF 320
35810 354 .AK.Q.EE.E.KA..ELA.K------------- 373
59479 513 ..RPST 518
48726 659 .. 660
66961 357 .E...AL.D.E.QL..ITKF.EE---NREK 383
QUERY 61 WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD 120
16961 560 ............................................................ 619
16961 252 DFGGYST.AEN..QEVF.GA.GEISEH.I..K...NEFREKL.EAMLSEH.NNI----NN 309
\
|
KN
46728 315 --.MEGIGYSQVVEN.LRT.FGTGTKTQ.D.KK..NES..YI.EATILSV.K.LN....V 378
\
|
NGYSAW
46730 320 -EGIGYS.V.---EN.LRSIFGTDEKAQQR.KQ..NES.AQI.TAMMYSV.KRLI..LNV 381
\
|
KGNFIW
46729 316 --EGIGYS..--VQN.LRSIFGTGTSAE.D.KK..NDH...I.KAMILSV.E.NR....Q 377
\ \
| |
YSAWN V
46726 315 -----.MEGI.YVEN.LRQ.FGTDEKA.QD.KQ..NES.EHI.RAMMFSIRSRLI..K.V 378
\ \
| |
SQV KEKFVW
21673 188 GEENLDEEM.SE..N.AQ--------GG.LLSSPYQYREQGGCGI..S.HETSNDT.DN. 239
21669 3 ...KTS.KKS.--KE.AS.KGA 22
14062 84 -------.YKAT..EDDEF.YQ..NG...LKNNAN..NTF..N.ESNYI.RQ.LESMQ.N 155
\ \ \
| | |
AYD SENQLLLMLH KNIDPT
32519 49 ..EE 52
55650 212 R... 215
31620 74 DD.CVDGGETEECDEDDDDCQEE..KK.--.ETKP.LK.RNDDEEEEECEE.DED.E.V. 132
\
|
V
47270 321 .ATS.GSLPISTRESTIS.F. 341
35763 378 .ENSD.D.. 386
35810 374 KKEADEK.KCEEAANKE.KAAEK..CE.AAKERKEAAE..KCEEAAK---.E.EAAERKK 430
51537 18 .E..SAPITAE.S.A...AF.RE.GLVSQ-Q 47
59479 519 Y.TMASVN.E.YA.LVNRFFYITELGE.VNNE-----LS.HFG...NKE.TK.MEKSL.E 574
\
|
R
4070 657 .FLKG..PKNK.T.SSE.--.QFYAAAQ.ESN.YVT.T.--.I.SP.PS 701
28721 251 ...KE.LE.GK.DQSKQ.ESQRK.EE.TV.SVTV.TGVIPASEE.AE.TAA... 308
\ \ \
| | |
EE K P
48726 661 E.EM..L..K----------QE.E.SQH.KEI.AL.AKLLE.-----------.EE..QT 699
66961 384 FTQ.D----LQDVD.RE.LK.SKS.VK..-----Q.QLQ..---------.E.V----.E 421
32876 270 T.FLEQ.NNQ.TNYQNL.A.AVLRGKFIALQ-A.LK..--EREE 312
\
|
DT
66681 2426 .P..VCVHRGT 2436
top | back
master-slave no identities (flag: -m 2)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
//////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 559
16961 194 SIIKTYTKETM--KDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDM 251
46728 267 LNLKEKLTYDAAVEGDLLLKKYNNVYSEDLCKDIKWSLEDFGDIIMGT-- 314
46730 270 LYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDM 319
46729 282 LLLKKYNNVYSEDLCKDIKWSLQDFGDIIMGTDM 315
46726 267 LNLKRKLMYDAAVEGDLLLKKNNYQYNKEFCKDIRWGLGDFGDIIMGT-- 314
21673 156 KKHKKDKKKKENSEVMSLYKTGQHKPKNATEH 187
14062 70 LMNKEIAHLREILN---- 83
31620 37 ETKVEKKKRSDDGDEEICDDDDEDCEDVVDIEECNED 73
47270 269 NSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRSAITTLQF 320
35810 354 LAKKQKEEDEKKACKELAKK------------- 373
59479 513 IGRPST 518
48726 659 DY 660
66961 357 KEKNKALKDVEKQLNKITKFIEE---NREK 383
QUERY 61 WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD 120
16961 560 WNDLSNRKLVGKINTNSKYVHRNKKNDKLFRDEWWKVIKKDVWNVISWVFKDKTVCKEDD 619
16961 252 DFGGYSTKAENKIQEVFKGAHGEISEHKIFRKEWWNEFREKLWEAMLSEHKNNI----NN 309
\
|
KN
46728 315 --DMEGIGYSQVVENNLRTVFGTGTKTQLDRKKWWNESKKYIWEATILSVKKKLNCKEDV 378
\
|
NGYSAW
46730 320 -EGIGYSKVV---ENNLRSIFGTDEKAQQRRKQWWNESKAQIWTAMMYSVKKRLICKLNV 381
\
|
KGNFIW
46729 316 --EGIGYSLV--VQNNLRSIFGTGTSAELDRKKWWNDHKKDIWKAMILSVKEKNRCKEDQ 377
\ \
| |
YSAWN V
46726 315 -----NMEGIGYVENNLRQVFGTDEKAKQDRKQWWNESKEHIWRAMMFSIRSRLICKKDV 378
\ \
| |
SQV KEKFVW
21673 188 GEENLDEEMVSEINNNAQ--------GGLLLSSPYQYREQGGCGIISSVHETSNDTKDND 239
21669 3 KKDKTSVKKSV--KETASKKGA 22
14062 84 -------KYKATINEDDEFVYQNKNGDKLLKNNANKVNTFDVNNESNYIFRQKLESMQDN 155
\ \ \
| | |
AYD SENQLLLMLH KNIDPT
32519 49 KEEE 52
55650 212 REDD 215
31620 74 DDDCVDGGETEECDEDDDDCQEEKKKKK--RETKPKLKKRNDDEEEEECEEDDEDCEEVD 132
\
|
V
47270 321 WATSSGSLPISTRESTISYFH 341
35763 378 DENSDKDDD 386
35810 374 KKEADEKKKCEEAANKEKKAAEKKKCEKAAKERKEAAEKKKCEEAAK---KEKEAAERKK 430
51537 18 FEDESAPITAEDSWAVISAFFREKGLVSQ-Q 47
59479 519 YNTMASVNLEGYANLVNRFFYITELGEKVNNE-----LSKHFGNVINKEFTKKMEKSLDE 574
\
|
R
4070 657 KFLKGSKPKNKNTKSSEL--DQFYAAAQKESNNYVTWTF--KIVSPEPS 701
28721 251 RKLKEKLETGKKDQSKQKESQRKFEEETVKSVTVDTGVIPASEEKAETTAAEDD 308
\ \ \
| | |
EE K P
48726 661 ENEMSNLKLK----------QENEKSQHLKEIEALKAKLLEV-----------TEEKEQT 699
66961 384 FTQLD----LQDVDTREKLKHSKSKVKKL-----QKQLQKD---------KEKV----DE 421
32876 270 TKFLEQNNNQDTNYQNLWAKAVLRGKFIALQ-AFLKKT--EREE 312
\
|
DT
66681 2426 FPDKVCVHRGT 2436
top | back
flat master-slave, show identities (flag: -m 3)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
///////////////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 ............................................................ 559
16961 194 S.IKT.T.ETM--.D.FIEASKK..QL.LK.ND..YNSKF.NDLKNS.L.YGHLAM.N.M 251
46728 267 .NL..KLTYD.AV.GDL.LK..N.VYSEDL..D.KWSLE.FG...M..-- 314
46730 270 .YL.RKLIYD.AV.GDL.LKLNNYRYN.DF..D.RWSLG.FG...M...M 319
46729 282 L.LK..N.VYSEDL..D.KWSLQ.FG...M...M 315
46726 267 .NL.RKLMYD.AV.GDL.LK.NNYQYN..F..D.RWGLG.FG...M..-- 314
21673 156 .KHK.D.KK..NSEVMSLYKTGQHKPKNA.EH 187
14062 70 LM..EI.HL.E.LN---- 83
31620 37 .TKVE.K.RSDDG.E.I.DDDDEDCE.VV..EECNED 73
47270 269 .STLL.K.LKF.CVQNMKM..E.N.WNKRQ..IDY.AQETG...SA.TTLQF 320
35810 354 .AK.Q.EE.E.KA..ELA.K------------- 373
59479 513 ..RPST 518
48726 659 .. 660
66961 357 .E...AL.D.E.QL..ITKF.EE---NREK 383
QUERY 61 WNDLSNRKLV-GK---INTNSKYVHR---NKKND----------KL--FRDEW--WKV-I 98
16961 560 ..........-..---..........---.....----------..--.....--...-. 597
16961 252 DFGGYST.AE-N.---.QEVF.GA.G---EISEH----------.IKN..K..--.NE-F 291
46728 315 --.MEGIGYS-QV---VEN.LRT.FG---TGTKT----------Q.--D.KK.--.NE-S 350
46730 320 -EGIGYS.V.-------EN.LRSIFG---TDEKA----------QQ--R.KQ.--.NE-S 353
46729 316 --EGIGYS..------VQN.LRSIFG---TGTSA----------E.--D.KK.--.ND-H 349
46726 315 -----.MEGI-.YSQVVEN.LRQ.FG---TDEKA----------.Q--D.KQ.--.NE-S 350
21673 188 GEENLDEEM.-SE---..N.AQ-----------G----------G.--LLSSP--YQY-R 217
14062 84 -------.YK-AT---..EDDEF.YQAYD..NG.SENQLLLMLH..--LKNNA--N..-N 127
31620 74 DD.CVDGGET-EE---CDEDDDDCQE---E..KK----------.----.ETK--P.L-K 109
47270 321 .ATS.GSLPI-ST---RESTIS.F. 341
35810 374 KKEADEK.KC-EE---AANKE.KAAE---K..CE----------.A--AKERK--EAA-E 411
51537 18 --.E..S--API-T 26
59479 519 Y.TMASVN.ER.Y---A.LVNRFFYI---TELGE----------.V--NNE--------L 552
4070 657 .---FLKG..PKNK---.T.SS----------E.----.QF--YAA-A 681
28721 251 ...K-E.EE-LE.GK.DQSK---Q.ESQ----------RK--.EE.T--V.SKV 285
48726 661 E.EM..L..K--------------QE---.E.SQ----------H.--KEI.A--L.A-K 688
66961 384 FTQ.D----L-QD---VD.RE.LK.S---KS.VK----------..---------Q.Q-L 412
32876 270 T.FLEQ---.NNQ.----------TN--YQNL.DTA.A-V 293
top | back
flat master-slave, no identities (flag: -m 4)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
/////////////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 559
16961 194 SIIKTYTKETM--KDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDM 251
46728 267 LNLKEKLTYDAAVEGDLLLKKYNNVYSEDLCKDIKWSLEDFGDIIMGT-- 314
46730 270 LYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDM 319
46729 282 LLLKKYNNVYSEDLCKDIKWSLQDFGDIIMGTDM 315
46726 267 LNLKRKLMYDAAVEGDLLLKKNNYQYNKEFCKDIRWGLGDFGDIIMGT-- 314
21673 156 KKHKKDKKKKENSEVMSLYKTGQHKPKNATEH 187
14062 70 LMNKEIAHLREILN---- 83
31620 37 ETKVEKKKRSDDGDEEICDDDDEDCEDVVDIEECNED 73
47270 269 NSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRSAITTLQF 320
35810 354 LAKKQKEEDEKKACKELAKK------------- 373
59479 513 IGRPST 518
48726 659 DY 660
66961 357 KEKNKALKDVEKQLNKITKFIEE---NREK 383
QUERY 61 WNDLSNRKLV-GK---INTNSKYVHR---NKKND----------KL--FRDEW--WKV-I 98
16961 560 WNDLSNRKLV-GK---INTNSKYVHR---NKKND----------KL--FRDEW--WKV-I 597
16961 252 DFGGYSTKAE-NK---IQEVFKGAHG---EISEH----------KIKNFRKEW--WNE-F 291
46728 315 --DMEGIGYS-QV---VENNLRTVFG---TGTKT----------QL--DRKKW--WNE-S 350
46730 320 -EGIGYSKVV-------ENNLRSIFG---TDEKA----------QQ--RRKQW--WNE-S 353
46729 316 --EGIGYSLV------VQNNLRSIFG---TGTSA----------EL--DRKKW--WND-H 349
46726 315 -----NMEGI-GYSQVVENNLRQVFG---TDEKA----------KQ--DRKQW--WNE-S 350
21673 188 GEENLDEEMV-SE---INNNAQ-----------G----------GL--LLSSP--YQY-R 217
14062 84 -------KYK-AT---INEDDEFVYQAYDNKNGDSENQLLLMLHKL--LKNNA--NKV-N 127
31620 74 DDDCVDGGET-EE---CDEDDDDCQE---EKKKK----------K----RETK--PKL-K 109
47270 321 WATSSGSLPI-ST---RESTISYFH 341
35810 374 KKEADEKKKC-EE---AANKEKKAAE---KKKCE----------KA--AKERK--EAA-E 411
51537 18 --FEDES--API-T 26
59479 519 YNTMASVNLERGY---ANLVNRFFYI---TELGE----------KV--NNE--------L 552
4070 657 K---FLKGSKPKNK---NTKSS----------EL----DQF--YAA-A 681
28721 251 RKLK-EKEE-LETGKKDQSK---QKESQ----------RK--FEEET--VKSKV 285
48726 661 ENEMSNLKLK--------------QE---NEKSQ----------HL--KEIEA--LKA-K 688
66961 384 FTQLD----L-QD---VDTREKLKHS---KSKVK----------KL---------QKQ-L 412
32876 270 TKFLEQ---NNNQD----------TN--YQNLWDTAKA-V 293
top | back
master-slave no identities and blunt ends (flag: -m 5)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
/////////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 559
16961 194 SIIKTYTKETM--KDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDM 251
46728 267 ----------LNLKEKLTYDAAVEGDLLLKKYNNVYSEDLCKDIKWSLEDFGDIIMGT-- 314
46730 270 ----------LYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDM 319
46729 282 --------------------------LLLKKYNNVYSEDLCKDIKWSLQDFGDIIMGTDM 315
46726 267 ----------LNLKRKLMYDAAVEGDLLLKKNNYQYNKEFCKDIRWGLGDFGDIIMGT-- 314
46726 ------------------------------------------------------------
54256 ------------------------------------------------------------
54254 ------------------------------------------------------------
54254 ------------------------------------------------------------
54253 ------------------------------------------------------------
21673 156 ----------------------------KKHKKDKKKKENSEVMSLYKTGQHKPKNATEH 187
47637 ------------------------------------------------------------
21669 ------------------------------------------------------------
17458 ------------------------------------------------------------
14062 70 ------------------------------------------LMNKEIAHLREILN---- 83
62307 ------------------------------------------------------------
77074 ------------------------------------------------------------
54457 ------------------------------------------------------------
37537 ------------------------------------------------------------
56044 ------------------------------------------------------------
56044 ------------------------------------------------------------
2044 ------------------------------------------------------------
33918 ------------------------------------------------------------
36768 ------------------------------------------------------------
75367 ------------------------------------------------------------
54739 ------------------------------------------------------------
8875 ------------------------------------------------------------
3222 ------------------------------------------------------------
56822 ------------------------------------------------------------
31241 ------------------------------------------------------------
29673 ------------------------------------------------------------
74706 ------------------------------------------------------------
74676 ------------------------------------------------------------
72545 ------------------------------------------------------------
1257 ------------------------------------------------------------
11592 ------------------------------------------------------------
27281 ------------------------------------------------------------
32519 ------------------------------------------------------------
32519 ------------------------------------------------------------
42572 ------------------------------------------------------------
56828 ------------------------------------------------------------
67058 ------------------------------------------------------------
55650 ------------------------------------------------------------
37933 ------------------------------------------------------------
31620 37 -----------------------ETKVEKKKRSDDGDEEICDDDDEDCEDVVDIEECNED 73
47270 269 --------NSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRSAITTLQF 320
75311 ------------------------------------------------------------
top | back
flat master-slave, no identities and blunt ends (flag: -m 6)
BLASTP 2.0.9 [May-07-1999]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= X52524 LOCUS PFEBA175_1
(501 letters)
Database: swissprot
80,000 sequences; 29,085,965 total letters
Searching.................................................done
Score E
Sequences producing significant alignments: (bits) Value
SWISSPROT:EBA1_PLAFC P19214 plasmodium falciparum (isolate camp... 950 0.0
SWISSPROT:PVDB_PLAKN P50493 plasmodium knowlesi. duffy receptor... 96 1e-19
SWISSPROT:PVDR_PLAVI P22290 plasmodium vivax. duffy receptor pr... 96 1e-19
SWISSPROT:PVDG_PLAKN P50494 plasmodium knowlesi. duffy receptor... 95 2e-19
SWISSPROT:PVDA_PLAKN P22545 plasmodium knowlesi. duffy receptor... 83 8e-16
SWISSPROT:SCP1_RAT Q03410 rattus norvegicus (rat). synaptonemal... 46 1e-04
SWISSPROT:SCP1_MOUSE Q62209 mus musculus (mouse). synaptonemal ... 43 0.001
////////////////////////////
QUERY 1 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 60
16961 500 NIDRIYDKNLLMIKEHILAIAIYESRILKRKYKNKDDKEVCKIINKTFADIRDIIGGTDY 559
16961 194 SIIKTYTKETM--KDHFIEASKKESQLLLKKNDNKYNSKFCNDLKNSFLDYGHLAMGNDM 251
46728 267 ----------LNLKEKLTYDAAVEGDLLLKKYNNVYSEDLCKDIKWSLEDFGDIIMGT-- 314
46730 270 ----------LYLKRKLIYDAAVEGDLLLKLNNYRYNKDFCKDIRWSLGDFGDIIMGTDM 319
46729 282 --------------------------LLLKKYNNVYSEDLCKDIKWSLQDFGDIIMGTDM 315
46726 267 ----------LNLKRKLMYDAAVEGDLLLKKNNYQYNKEFCKDIRWGLGDFGDIIMGT-- 314
46726 ------------------------------------------------------------
54256 ------------------------------------------------------------
54254 ------------------------------------------------------------
54254 ------------------------------------------------------------
54253 ------------------------------------------------------------
21673 156 ----------------------------KKHKKDKKKKENSEVMSLYKTGQHKPKNATEH 187
47637 ------------------------------------------------------------
21669 ------------------------------------------------------------
17458 ------------------------------------------------------------
14062 70 ------------------------------------------LMNKEIAHLREILN---- 83
62307 ------------------------------------------------------------
77074 ------------------------------------------------------------
54457 ------------------------------------------------------------
37537 ------------------------------------------------------------
56044 ------------------------------------------------------------
56044 ------------------------------------------------------------
2044 ------------------------------------------------------------
33918 ------------------------------------------------------------
36768 ------------------------------------------------------------
75367 ------------------------------------------------------------
54739 ------------------------------------------------------------
8875 ------------------------------------------------------------
3222 ------------------------------------------------------------
56822 ------------------------------------------------------------
31241 ------------------------------------------------------------
29673 ------------------------------------------------------------
74706 ------------------------------------------------------------
74676 ------------------------------------------------------------
72545 ------------------------------------------------------------
1257 ------------------------------------------------------------
11592 ------------------------------------------------------------
27281 ------------------------------------------------------------
32519 ------------------------------------------------------------
32519 ------------------------------------------------------------
42572 ------------------------------------------------------------
56828 ------------------------------------------------------------
67058 ------------------------------------------------------------
55650 ------------------------------------------------------------
37933 ------------------------------------------------------------
31620 37 -----------------------ETKVEKKKRSDDGDEEICDDDDEDCEDVVDIEECNED 73
47270 269 --------NSTLLKKHLKFICVQNMKMLKEKNKWNKRQEVIDYIAQETGDIRSAITTLQF 320
75311 ------------------------------------------------------------
35763 ------------------------------------------------------------
941 ------------------------------------------------------------
8717 ------------------------------------------------------------
21303 ------------------------------------------------------------
35810 ------------------------------------------------------------
35810 354 ---------------------------LAKKQKEEDEKKACKELAKK------------- 373
39546 ------------------------------------------------------------
39546 ------------------------------------------------------------
39573 ------------------------------------------------------------
41675 ------------------------------------------------------------
44670 ------------------------------------------------------------
46724 ------------------------------------------------------------
37536 ------------------------------------------------------------
37536 ------------------------------------------------------------
70500 ------------------------------------------------------------
27282 ------------------------------------------------------------
73591 ------------------------------------------------------------
9579 ------------------------------------------------------------
35788 ------------------------------------------------------------
38751 ------------------------------------------------------------
35782 ------------------------------------------------------------
66308 ------------------------------------------------------------
68784 ------------------------------------------------------------
57746 ------------------------------------------------------------
64681 ------------------------------------------------------------
79771 ------------------------------------------------------------
3675 ------------------------------------------------------------
5570 ------------------------------------------------------------
8871 ------------------------------------------------------------
33917 ------------------------------------------------------------
41164 ------------------------------------------------------------
54640 ------------------------------------------------------------
55479 ------------------------------------------------------------
79754 ------------------------------------------------------------
10434 ------------------------------------------------------------
14947 ------------------------------------------------------------
14947 ------------------------------------------------------------
22518 ------------------------------------------------------------
26768 ------------------------------------------------------------
27268 ------------------------------------------------------------
28437 ------------------------------------------------------------
35209 ------------------------------------------------------------
51537 ------------------------------------------------------------
51591 ------------------------------------------------------------
59479 513 ------------------------------------------------------IGRPST 518
68593 ------------------------------------------------------------
4070 ------------------------------------------------------------
4313 ------------------------------------------------------------
6361 ------------------------------------------------------------
14969 ------------------------------------------------------------
27220 ------------------------------------------------------------
28435 ------------------------------------------------------------
28721 ------------------------------------------------------------
36360 ------------------------------------------------------------
41690 ------------------------------------------------------------
48580 ------------------------------------------------------------
54462 ------------------------------------------------------------
top | back
XML (flag: -m 7)
<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "NCBI_BlastOutput.dtd">
<BlastOutput>
<BlastOutput_program>blastn</BlastOutput_program>
<BlastOutput_version>blastn 2.2.3 [May-13-2002]</BlastOutput_version>
<BlastOutput_reference>~Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, ~Jinghui Zhang, Zheng Zhang, Web
b Miller, and David J. Lipman (1997), ~"Gapped BLAST and PSI-BLAST: a new generation of protein database search~programs",
Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
<BlastOutput_db>embl</BlastOutput_db>
<BlastOutput_query-ID>lcl|QUERY</BlastOutput_query-ID>
<BlastOutput_query-def>AF178033</BlastOutput_query-def>
<BlastOutput_query-len>811</BlastOutput_query-len>
<BlastOutput_param>
<Parameters>
<Parameters_expect>10</Parameters_expect>
<Parameters_include>0</Parameters_include>
<Parameters_sc-match>1</Parameters_sc-match>
<Parameters_sc-mismatch>-3</Parameters_sc-mismatch>
<Parameters_gap-open>5</Parameters_gap-open>
<Parameters_gap-extend>2</Parameters_gap-extend>
<Parameters_filter>D</Parameters_filter>
</Parameters>
</BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
<Iteration_iter-num>1</Iteration_iter-num>
<Iteration_hits>
<Hit>
<Hit_num>1</Hit_num>
<Hit_id>gnl|BL_ORD_ID|142512</Hit_id>
<Hit_def>EMORG:AF178033 Af178033 Poecilia reticulata from Trinidad and Tobago NADH dehydrogenase subunit 2 (NADH2) gene, p
artial cds; mitochondrial gene for mitochondrial product. 3/2002</Hit_def>
<Hit_accession>142512</Hit_accession>
<Hit_len>811</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>1566.56</Hsp_bit-score>
<Hsp_score>790</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>811</Hsp_query-to>
<Hsp_hit-from>1</Hsp_hit-from>
<Hsp_hit-to>811</Hsp_hit-to>
<Hsp_pattern-from>0</Hsp_pattern-from>
<Hsp_pattern-to>0</Hsp_pattern-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>811</Hsp_identity>
<Hsp_positive>811</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>811</Hsp_align-len>
<Hsp_density>0</Hsp_density>
<Hsp_qseq>AGCACCCACTGGTATCTTGCCTGAATAGGAATTGAAATTAACACATTAGCCATTATCCCCCTAATATCACAAAACCACACCCCACGAGCAACTGAGGCCACCACTAAA
GCCATAAAAATTGGACTTGCCCCCCTTCACAGCTGAATACCAGAAGTAATACAAGGCTTAAGCCTACTTAATGGATTAATTCTATCCACTTGACAAAAACTTGCCCCCCTTTACCTCATCTACCAAATTCAA
CCAACCAACTCCAACATTTTTATTACCCTAGGACTTCTATCCATTATTGTAGGGGGGTGAGGGGGATTTAACCAAGTACAACTCCGAAAAATCCTAGCATACTCATCAATTGCCCACTTAGGGTGAATAATT
TTAATTCTTTCATTCTCACCTCCACTAGCCCTACTCACAATCCTAATTTATCTCCTAATAACCTTCTCACTATTTTCTTCTTTTATATTAACCCGAACCACACACATCAACTCTCTAGCCACTACATGGGCC
AAAATCCCAATTCTAACCATCTCAGCCCCCCTAGTCCTATTATCCCTAGGAGGATTGCCCCCTCTTACAGGATTTATACCAAAATGACTTATTCTCCAAGAATTAACAAAGCAAGACCTAGCCCCAATTGCC
ACTCTAGCCGCACTTTCATCCCTATTCAGCCTATATTTTTATC</Hsp_qseq>
<Hsp_hseq>AGCACCCACTGGTATCTTGCCTGAATAGGAATTGAAATTAACACATTAGCCATTATCCCCCTAATATCACAAAACCACACCCCACGAGCAACTGAGGCCACCACTAAA
GCCATAAAAATTGGACTTGCCCCCCTTCACAGCTGAATACCAGAAGTAATACAAGGCTTAAGCCTACTTAATGGATTAATTCTATCCACTTGACAAAAACTTGCCCCCCTTTACCTCATCTACCAAATTCAA
CCAACCAACTCCAACATTTTTATTACCCTAGGACTTCTATCCATTATTGTAGGGGGGTGAGGGGGATTTAACCAAGTACAACTCCGAAAAATCCTAGCATACTCATCAATTGCCCACTTAGGGTGAATAATT
TTAATTCTTTCATTCTCACCTCCACTAGCCCTACTCACAATCCTAATTTATCTCCTAATAACCTTCTCACTATTTTCTTCTTTTATATTAACCCGAACCACACACATCAACTCTCTAGCCACTACATGGGCC
AAAATCCCAATTCTAACCATCTCAGCCCCCCTAGTCCTATTATCCCTAGGAGGATTGCCCCCTCTTACAGGATTTATACCAAAATGACTTATTCTCCAAGAATTAACAAAGCAAGACCTAGCCCCAATTGCC
ACTCTAGCCGCACTTTCATCCCTATTCAGCCTATATTTTTATC</Hsp_hseq>
<Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
<Hit>
<Hit_num>2</Hit_num>
<Hit_id>gnl|BL_ORD_ID|117501</Hit_id>
<Hit_def>EMORG:AF031394 Af031394 Poecilia reticulata NADH dehydrogenase subunit 2 gene, mitochondrial gene encoding mitoch
ondrial protein, complete cds. 7/1999</Hit_def>
<Hit_accession>117501</Hit_accession>
<Hit_len>1105</Hit_len>
<Hit_hsps>
<Hsp>
<Hsp_num>1</Hsp_num>
<Hsp_bit-score>1542.77</Hsp_bit-score>
<Hsp_score>778</Hsp_score>
<Hsp_evalue>0</Hsp_evalue>
<Hsp_query-from>1</Hsp_query-from>
<Hsp_query-to>811</Hsp_query-to>
<Hsp_hit-from>99</Hsp_hit-from>
<Hsp_hit-to>909</Hsp_hit-to>
<Hsp_pattern-from>0</Hsp_pattern-from>
<Hsp_pattern-to>0</Hsp_pattern-to>
<Hsp_query-frame>1</Hsp_query-frame>
<Hsp_hit-frame>1</Hsp_hit-frame>
<Hsp_identity>808</Hsp_identity>
<Hsp_positive>808</Hsp_positive>
<Hsp_gaps>0</Hsp_gaps>
<Hsp_align-len>811</Hsp_align-len>
<Hsp_density>0</Hsp_density>
<Hsp_qseq>AGCACCCACTGGTATCTTGCCTGAATAGGAATTGAAATTAACACATTAGCCATTATCCCCCTAATATCACAAAACCACACCCCACGAGCAACTGAGGCCACCACTAAA
TATTTTTTTGCCCAAGCAACTGCCTCAGCAACACTACTATTTGCTAGCATCTCTAATGCATTCCTCACCGGAGAGTGGGACATTCTACAAACCCCTAATACCCTTACTTCTTCACTAATTACCCTAGCCCTT
GCCATAAAAATTGGACTTGCCCCCCTTCACAGCTGAATACCAGAAGTAATACAAGGCTTAAGCCTACTTAATGGATTAATTCTATCCACTTGACAAAAACTTGCCCCCCTTTACCTCATCTACCAAATTCAA
CCAACCAACTCCAACATTTTTATTACCCTAGGACTTCTATCCATTATTGTAGGGGGGTGAGGGGGATTTAACCAAGTACAACTCCGAAAAATCCTAGCATACTCATCAATTGCCCACTTAGGGTGAATAATT
TTAATTCTTTCATTCTCACCTCCACTAGCCCTACTCACAATCCTAATTTATCTCCTAATAACCTTCTCACTATTTTCTTCTTTTATATTAACCCGAACCACACACATCAACTCTCTAGCCACTACATGGGCC
AAAATCCCAATTCTAACCATCTCAGCCCCCCTAGTCCTATTATCCCTAGGAGGATTGCCCCCTCTTACAGGATTTATACCAAAATGACTTATTCTCCAAGAATTAACAAAGCAAGACCTAGCCCCAATTGCC
ACTCTAGCCGCACTTTCATCCCTATTCAGCCTATATTTTTATC</Hsp_qseq>
<Hsp_hseq>AGCACCCACTGGTATCTTGCCTGAATAGGAATTGAAATTAACACATTAGCCATTATCCCCCTAATATCACAAAACCACACCCCACGAGCAACTGAGGCCACCACTAAA
TATTTTTTTGCCCAAGCAACTGCCTCAGCAACACTACTATTTGCTAGCATCTCTAATGCATTCCTCACCGGAGAGTGGGACATTCTACAAACCCCTAATACCCTTACTTCTTCACTAATTACCCTAGCCCTT
GCCATAAAAATTGGACTTGCCCCCCTTCACAGCTGAATACCAGAAGTAATACAAGGCTTAAGCCTACTTAATGGATTAATTCTATCCACTTGACAAAAACTTGCCCCCCTTTACCTCATCTACCAAATTCAA
CCAACCAACTCCAACATTTTTATTACCCTAGGACTTCTATCCATTATTGTGGGGGGGTGAGGGGGATTTAACCAAGTACAACTCCGAAAAATCCTAGCATACTCATCAATTGCCCACTTAGGGTGAATAATT
TTAATTCTTTCATTCGCACCTCCACTAGCCCTACTCACAATCCTAATTTATCTCCTAATAACCTTCTCACTATTTTCTTCTTTTATATTAACCCGAACCACACACATCAACTCTCTAGCCACTACATGGGCC
AAAATCCCAATTCTAACCATCTCAACCCCCCTAGTCCTATTATCCCTAGGAGGATTGCCCCCTCTTACAGGATTTATACCAAAATGACTTATTCTCCAAGAATTAACAAAGCAAGACCTAGCCCCAATTGCC
ACTCTAGCCGCACTTTCATCCCTATTCAGCCTATATTTTTATC</Hsp_hseq>
<Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
</Hsp>
</Hit_hsps>
</Hit>
top | back
Tabular (flag: -m 8)
AF178033 EMORG:AF178033 100.00 811 0 0 1 811 1 811 0.0 1566.6
AF178033 EMORG:AF031394 99.63 811 3 0 1 811 99 909 0.0 1542.8
AF178033 EMORG:AF031393 95.07 811 40 0 1 811 99 909 0.0 1249.4
AF178033 EMORG:AF178031 94.82 811 42 0 1 811 1 811 0.0 1233.5
AF178033 EMORG:AF178032 94.57 811 44 0 1 811 1 811 0.0 1217.7
AF178033 EMORG:AF353195 85.93 803 113 0 1 803 99 901 0.0 670.5
AF178033 EMORG:AF353192 85.86 806 114 0 1 806 99 904 0.0 670.5
AF178033 EMORG:AF353196 85.48 806 117 0 1 806 99 904 0.0 644.8
AF178033 EMORG:AF031391 85.48 806 117 0 1 806 99 904 0.0 644.8
AF178033 EMORG:AF353201 85.36 806 118 0 1 806 99 904 1e-179 636.8
AF178033 EMORG:AF353200 84.99 806 121 0 1 806 99 904 2e-172 613.0
AF178033 EMORG:AF353197 84.99 806 121 0 1 806 99 904 2e-172 613.0
AF178033 EMORG:AF353199 84.86 806 122 0 1 806 99 904 2e-171 609.1
AF178033 EMORG:AF031387 84.80 809 123 0 1 809 99 907 4e-170 605.1
AF178033 EMORG:AF353198 84.74 806 123 0 1 806 99 904 6e-169 601.1
AF178033 EMORG:AF031392 84.74 806 123 0 1 806 99 904 2e-168 599.2
AF178033 EMORG:AF080490 84.89 794 120 0 16 809 114 907 2e-165 589.3
AF178033 EMORG:AF031395 84.80 809 123 0 1 809 99 907 9e-165 587.3
AF178033 EMORG:AF353193 84.49 806 125 0 1 806 99 904 5e-163 581.3
AF178033 EMORG:AF353194 84.24 806 127 0 1 806 99 904 8e-159 567.4
AF178033 EMORG:AF031402 84.09 811 129 0 1 811 99 909 2e-156 559.5
AF178033 EMORG:AF031399 84.00 806 129 0 1 806 99 904 2e-153 549.6
AF178033 EMORG:AF031400 83.87 806 130 0 1 806 99 904 1e-148 533.7
AF178033 EMORG:AF031396 83.77 807 131 0 5 811 103 909 2e-144 519.9
AF178033 EMORG:AF080489 83.50 806 133 0 1 806 99 904 7e-144 517.9
AF178033 EMORG:AF031389 83.35 811 135 0 1 811 99 909 1e-142 513.9
AF178033 EMORG:AF412167 83.48 811 134 0 1 811 67 877 4e-142 511.9
AF178033 EMORG:AF080488 83.44 809 134 0 1 809 99 907 7e-141 508.0
AF178033 EMORG:AF031388 83.64 807 130 2 1 806 99 904 1e-139 504.0
AF178033 EMORG:AF080491 83.23 811 136 0 1 811 119 929 6e-138 498.1
AF178033 EMORG:AF353202 85.67 586 84 0 221 806 319 904 2e-137 496.1
AF178033 EMORG:AF353202 86.98 192 25 0 1 192 99 290 2.7e-35 157.1
AF178033 EMORG:AF031398 83.11 811 137 0 1 811 99 909 2e-137 496.1
AF178033 EMORG:AF031397 82.98 811 138 0 1 811 99 909 6e-135 488.2
AF178033 EMORG:AF031390 82.93 791 135 0 1 791 99 889 4e-133 482.2
AF178033 EMORG:AF080492 82.51 806 141 0 4 809 102 907 8e-125 454.5
AF178033 EMORG:AF080487 82.26 806 143 0 1 806 119 924 2e-122 446.5
AF178033 EMORG:AF031401 84.15 650 103 0 1 650 99 748 2e-122 446.5
[snip]
top | back
Tabular with comment lines (flag: -m 9)
# BLASTN 2.2.3 [May-13-2002]
# Database: other_vertebrate
# Query: AF178033
# Fields:
Query id,Subject id,% identity,alignment length,mismatches,gap openings,q. start,q. end,s. start,s. end,e-value,bit score
AF178033 EMORG:AF178033 100.00 811 0 0 1 811 1 811 0.0 1566.6
AF178033 EMORG:AF031394 99.63 811 3 0 1 811 99 909 0.0 1542.8
AF178033 EMORG:AF031393 95.07 811 40 0 1 811 99 909 0.0 1249.4
AF178033 EMORG:AF178031 94.82 811 42 0 1 811 1 811 0.0 1233.5
AF178033 EMORG:AF178032 94.57 811 44 0 1 811 1 811 0.0 1217.7
AF178033 EMORG:AF353195 85.93 803 113 0 1 803 99 901 0.0 670.5
AF178033 EMORG:AF353192 85.86 806 114 0 1 806 99 904 0.0 670.5
AF178033 EMORG:AF353196 85.48 806 117 0 1 806 99 904 0.0 644.8
AF178033 EMORG:AF031391 85.48 806 117 0 1 806 99 904 0.0 644.8
AF178033 EMORG:AF353201 85.36 806 118 0 1 806 99 904 1e-179 636.8
AF178033 EMORG:AF353200 84.99 806 121 0 1 806 99 904 2e-172 613.0
AF178033 EMORG:AF353197 84.99 806 121 0 1 806 99 904 2e-172 613.0
AF178033 EMORG:AF353199 84.86 806 122 0 1 806 99 904 2e-171 609.1
AF178033 EMORG:AF031387 84.80 809 123 0 1 809 99 907 4e-170 605.1
AF178033 EMORG:AF353198 84.74 806 123 0 1 806 99 904 6e-169 601.1
AF178033 EMORG:AF031392 84.74 806 123 0 1 806 99 904 2e-168 599.2
AF178033 EMORG:AF080490 84.89 794 120 0 16 809 114 907 2e-165 589.3
AF178033 EMORG:AF031395 84.80 809 123 0 1 809 99 907 9e-165 587.3
AF178033 EMORG:AF353193 84.49 806 125 0 1 806 99 904 5e-163 581.3
AF178033 EMORG:AF353194 84.24 806 127 0 1 806 99 904 8e-159 567.4
AF178033 EMORG:AF031402 84.09 811 129 0 1 811 99 909 2e-156 559.5
AF178033 EMORG:AF031399 84.00 806 129 0 1 806 99 904 2e-153 549.6
AF178033 EMORG:AF031400 83.87 806 130 0 1 806 99 904 1e-148 533.7
AF178033 EMORG:AF031396 83.77 807 131 0 5 811 103 909 2e-144 519.9
AF178033 EMORG:AF080489 83.50 806 133 0 1 806 99 904 7e-144 517.9
AF178033 EMORG:AF031389 83.35 811 135 0 1 811 99 909 1e-142 513.9
AF178033 EMORG:AF412167 83.48 811 134 0 1 811 67 877 4e-142 511.9
AF178033 EMORG:AF080488 83.44 809 134 0 1 809 99 907 7e-141 508.0
AF178033 EMORG:AF031388 83.64 807 130 2 1 806 99 904 1e-139 504.0
AF178033 EMORG:AF080491 83.23 811 136 0 1 811 119 929 6e-138 498.1
AF178033 EMORG:AF353202 85.67 586 84 0 221 806 319 904 2e-137 496.1
AF178033 EMORG:AF353202 86.98 192 25 0 1 192 99 290 2.7e-35 157.1
AF178033 EMORG:AF031398 83.11 811 137 0 1 811 99 909 2e-137 496.1
AF178033 EMORG:AF031397 82.98 811 138 0 1 811 99 909 6e-135 488.2
AF178033 EMORG:AF031390 82.93 791 135 0 1 791 99 889 4e-133 482.2
AF178033 EMORG:AF080492 82.51 806 141 0 4 809 102 907 8e-125 454.5
AF178033 EMORG:AF080487 82.26 806 143 0 1 806 119 924 2e-122 446.5
AF178033 EMORG:AF031401 84.15 650 103 0 1 650 99 748 2e-122 446.5
[snip]
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